VIRmiRNA -A database of viral miRNA
VMR_0964 details

miRNA Id:VMR_0964
Virus:Rhesus lymphocryptovirus (RLCV)
Taxonomy:View
Nomenclature:rlcv-miR-rl1-13-5p
miRNA Sequence: ccugggcaugggcuaugaaa
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):55
pre-miRNA:rlcv-mir-rl1-13
pre-miRNA Sequence:cccgugucuugauccugggcaugggcuaugaaacaguucuaacaauuggaucauagccaguguccagggacggugcaccggg
Arm: 5p
Cell line: PEL, BL, LCL cells
Method:Cloned, Solexa(NGS)
Reference: 16557291, 20219930
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed